Graduate Student Projects

These are our Graduate Student Collaboration Projects

Providing programming support services to compile Matlab codes and externalize them on the web. This project allows users/paper reviewers to try the algorithm from a website hosted by the CBI. In addition, this approach allows the externalization of algorithms implemented in the robust Matlab programming environment to multiple users without the need for multiple Matlab licenses and the overhead of requiring users to install Matlab or the Matlab Compiler Runtime on their systems. Collaborating with Dr. Yufei Huang(Dept. of Electrical Engineering, UTSA)

Providing support for utilization of Cheetah Cluster GPU nodes towards running GPU enabled Molecular Dynamics simulations with the NAMD software package.

Collaborating with Jeremiah J. Babcock, Ph.D. Candidate, UTSA Dept. of Physics & Astronomy
Laboratory: (Brancaleon) Molecular Biophysics Laboratory at UTSA,
Website: https://sites.google.com/site/brancaleonbiophysicsutsa
Publications: TBD

Collaborating with David Stockton on a simulation automation framework for HPC environments.
PI: Dr. Fidel Santamaria

Collaborating with Namrata Mohapatra to enable MCELL(http://mcell.org) based simulations in an HPC cluster environment.
PI: Dr. Fidel Santamaria