Neurological Simulation Software

Genesis

Genesis is a general purpose simulation platform that was developed to support the simulation of neural systems ranging from subcellular components and biochemical reactions to complex models of single neurons, simulations of large networks, and systems-level models.

Note:

Users must have a copy of the genesis config in their home directory first. .simrc is for all genesis users, while .nxsimrc is for genesis without xodus, and .minsimrc is for minimal genesis without object libraries or xodus.

Command: 
genesis
Location: 
/share/apps/genesis-2.3

Fractional Integration Toolbox (FIT)

Software from the Dr. Fidel Santamaria Laboratory @ UTSA:

Fractional Integration Toolbox(tm):

Software download page: FIT TOOLBOX

 

Publication References:

[1] Marinov TM,  Ramirez N, and Santamaria F. Fractional Integration Toolbox. Fractional Calculus and Applied Analysis. September (2013) 16:3, pp 670-681. DOI 10.2478/s13540-013-0042-7